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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912543.1_cds_XP_016462629.1_55840
CDS Infomation

[gene=LOC107785770] [db_xref=GeneID:107785770] [protein=polygalacturonase-like] [protein_id=XP_016462629.1] [location=join(16399..16845,17521..17810,18412..18640,18727..18948)] [gbkey=CDS]
Sequence

ATGAAAATGGAGAACCCCATTTTTTCTCTTCTTCTTATTTCACTTCTCTCCATTTTCTTC
ACTAAAACCATAGCTGATATTGTGACATTGAATGTTCTAAATTTTGGTGCAAAACCAGAT
GGAAAAACTGACTCAACAAATGCTTTTTTAACTGCTTGGGCAGCAGCTTGTGACTCTTCA
AAACCAGCCACCATATTTGTCCCACAAGGAAAGTATTTGGTTAAACAAGCACATTTTAAA
GGAAAATGCAAGAATAGAGCCATAACATTCCAAATTGATGGCACATTTATTGCACCCTCC
GATTATAATGTGATTGGAAATTCCAAAAATTGGCTTTTATTTCAAGGTGTTGATGGAGTT
TCCATTCATGGTGGAATTCTTGATGGCCAAGGGAATGATTTGTGGGCTTGCAAGGCCTCA
GGCAAGAACTGCCCGAGCGGCGCTACGACTCTGGGATTTTCCAACTCAAACAATATAGCA
ATAACAGGACTAACTTCATTGAACAGTCAAATGTTTCACATTGTCTTCAATGGGTGCAAA
AATGTGAAGTTGCAGGCTGTCAAAGGTCTTGCCTCTGGCAAAAGCCCGAATACTGATGGT
ATTCACATTCAGTTATCATCTGACATCTCGATTTTAAACTCGAAAATCAGTACCGGAGAT
GATTGCATCTCCATTGGTCCCGGAACTACTAACTTGTGGATCCAAAACATGGCTTGTGGC
CCTGGCCATGGAATCAGCATTGGGAGTTTAGGCAAGGATTTTCAAGAAGCAGGGGTGCAA
AATGTGACAGTAAAATCAGTTACATTTAAGAACACACAAAATGGTGTGAGGATCAAAACA
TGGGGCAGACCAAGTACTGGCTTTGTAAAAAATGTTATTTTCCAACATGCTACAATGATT
AACGTTCAAAATCCAATTGTTATTGATCAGAATTACTGTCCATATAACAAAAATTGTCCT
GGCCAGGTGTCAGGTGTGACAATTAGTGATGTTACATATCAAGATATACATGGAAGTTCA
GCAACACGAGTCGCGATGAAATTTGATTGCAGTAAAAGAAATCCATGCCGAGGAATAAAA
TTGGAAGATGTAGATCTCACTTATCAGAATCAACCAGCTGCTCAAGCTTCTTGTGCTAAT
GCTGCCGGAACAACTTCTGGTGTAATTCAACCAACAAGTTGTTTATAA

Peptide Sequence

PEP ID

XP_016462629.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MKMENPIFSLLLISLLSIFFTKTIADIVTLNVLNFGAKPDGKTDSTNAFLTAWAAACDSS
KPATIFVPQGKYLVKQAHFKGKCKNRAITFQIDGTFIAPSDYNVIGNSKNWLLFQGVDGV
SIHGGILDGQGNDLWACKASGKNCPSGATTLGFSNSNNIAITGLTSLNSQMFHIVFNGCK
NVKLQAVKGLASGKSPNTDGIHIQLSSDISILNSKISTGDDCISIGPGTTNLWIQNMACG
PGHGISIGSLGKDFQEAGVQNVTVKSVTFKNTQNGVRIKTWGRPSTGFVKNVIFQHATMI
NVQNPIVIDQNYCPYNKNCPGQVSGVTISDVTYQDIHGSSATRVAMKFDCSKRNPCRGIK
LEDVDLTYQNQPAAQASCANAAGTTSGVIQPTSCL

Transcript Sequence

Gene sequence data has not been registered.